Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0171Conserved hypothetical protein. (248 aa)    
Predicted Functional Partners:
cofF
gamma-F420-2:alpha-L-glutamate ligase; Catalyzes the ATP-dependent addition of one alpha-linked L- glutamate molecule to coenzyme gamma-F420-2, producing coenzyme alpha- F420-3. Thus, caps the gamma-polyglutamate tail of coenzyme F420 with a terminal alpha-linked glutamate (By similarity).
  
    0.798
MMP0169
Conserved hypothetical protein.
  
    0.738
rce1
Conserved Hypothetical Protein; Endopeptidase which proteolytically removes the C-terminal three residues of farnesylated peptides containing the CAAX motif where C is cysteine, A is an aliphatic amino acid and X is any amino acid. Cleaves the CAAX motif C-terminal to both P1 and P1' positions. Hydrolysis depends on a farnesylated cysteine residue and no activity is shown towards geranylgeranylated peptides.
  
    0.628
MMP0484
Possible sodium/proton antiporter.
  
    0.617
MMP0494
DEAD/DEAH box helicase domain-containing protein; Distinct helicase family member with a unique C-terminal domain including a metal-binding cysteine cluster.
   
    0.605
MMP0751
Conserved hypothetical archaeal protein.
   
    0.605
MMP0690
Polyferredoxin.
  
    0.598
MMP0168
Transcriptional regulator PadR-like family.
       0.556
MMP0167
ABC transporter ATP binding protein family member.
     
 0.553
MMP0166
MatE family member (drug/sodium antiporters).
     
 0.550
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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