Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0190Conserved hypothetical protein; Similar to fragment of K+-dependent Na+/Ca+ exchanger protein. (320 aa)    
Predicted Functional Partners:
MMP1067
Uncharacterized iron-sulfur protein MMP1067; Succinate dehydrogenase/fumarate reductase iron-sulfur subunit // Methanosarcina type heterodisulfide reductase subunit D; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.827
pcm
Protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
  
    0.819
arsA
Putative arsenical pump-driving ATPase.
  
   0.682
MMP0707
Na+/H+ exchanger.
 
 
 
 0.646
yodP
GCN5-related N-acetyltransferase; Catalyzes the acetylation of beta-lysine to N6-acetyl-beta- lysine, a compatible solute produced by methanogenic archaea that helps cells to cope with salt stress; Belongs to the acetyltransferase family.
      
 0.632
MMP0710
Cation-transporting ATPase.
  
 
 0.598
tbp
TATA-binding protein (TBP); General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
    
 
 0.521
MMP0191
Conserved hypothetical protein; Esterase/lipase/thioesterase domain.
  
  
 0.496
MMP1292
Glucan 1,4-alpha-glucosidase (glucoamylase).
  
    0.486
MMP0520
Cation transport ATPase.
  
 
 0.477
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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