STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0198ABC-type iron(III) transport system, ATP binding protein. (260 aa)    
Predicted Functional Partners:
MMP0197
ABC-type iron(III) transport system, permease component.
 
 0.999
MMP0196
ABC-type iron(III) transport system, periplasmic binding protein.
 
 
 0.996
MMP1182
Iron(III) dicitrate transport system permease protein.
 
 0.994
MMP1181
Iron transport system binding protein.
  
 
 0.944
MMP1176
Putative iron transport system substrate-binding protein, N-term half.
  
 
 0.941
MMP1177
Putative iron transport system substrate-binding protein, C-term half.
  
 
 0.941
MMP1178
Iron transport Periplasmic binding protein.
  
 
 0.941
cobQ
Cobyrinic acid a,c-diamide synthase:Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
    
 0.898
fmdE
Molybdenum containing formylmethanofuran dehydrogenase, subunit E; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242: 156-162.
  
    0.876
MMP0199
Conserved hypothetical archaeal protein.
 
    0.855
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.