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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0235Conserved hypothetical protein. (297 aa)    
Predicted Functional Partners:
MMP0234
Conserved hypothetical protein.
  
  
 0.986
MMP0236
Conserved hypothetical archaeal protein.
  
  
 0.969
MMP0233
Conserved hypothetical Archael protein.
  
  
 0.967
MMP0231
Conserved hypothetical protein.
  
  
 0.958
MMP0237
Conserved hypothetical protein.
  
  
 0.891
MMP0238
Conserved hypothetical archaeal protein.
  
  
 0.881
MMP0232
Conserved Hypthetical Protein.
  
    0.880
MMP0241
Conserved hypothetical archaeal protein.
  
  
 0.855
MMP0240
Conserved hypothetical archaeal protein.
  
  
 0.850
MMP0239
Conserved hypothetical archaeal protein.
  
  
 0.842
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.