Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0247Conserved hypothetical archaeal protein; Probably involved in the biogenesis of the ribosome. (164 aa)    
Predicted Functional Partners:
MMP0248
DNA-directed RNA polymerase related protein.
  
    0.984
rpl18a
Ribosomal LX protein.
  
   0.974
rpl37ae
Ribosomal L37ae protein; Binds to the 23S rRNA.
  
   0.973
MMP0016
Conserved hypothetical protein.
   
 
 0.971
MMP0246
Conserved hypothetical archaeal protein.
  
    0.969
rps8e
SSU ribosomal protein S8E.
   
 
 0.952
rpmD
LSU ribosomal protein L30P.
  
 
 0.951
MMP0250
Conserved hypothetical protein.
  
 
 0.949
rpl15
LSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 
 0.936
MMP0901
ATP/GTP-binding site motif A (P-loop):Small GTP-binding protein domain.
   
 
 0.931
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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