STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0247Conserved hypothetical archaeal protein; Probably involved in the biogenesis of the ribosome. (164 aa)    
Predicted Functional Partners:
MMP0016
Conserved hypothetical protein.
   
 
 0.993
rpl18a
Ribosomal LX protein.
  
   0.987
MMP0248
DNA-directed RNA polymerase related protein.
  
    0.982
rpmD
LSU ribosomal protein L30P.
  
 
 0.977
MMP0901
ATP/GTP-binding site motif A (P-loop):Small GTP-binding protein domain.
   
 
 0.972
rps8e
SSU ribosomal protein S8E.
   
 
 0.972
MMP0246
Conserved hypothetical archaeal protein.
  
    0.969
rpl10
LSU ribosomal protein L10E; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
 
 0.963
rpl37ae
Ribosomal L37ae protein; Binds to the 23S rRNA.
  
   0.962
MMP1334
Solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding.
   
 
 0.954
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.