Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0288Conserved hypothetical archeal protein. (251 aa)    
Predicted Functional Partners:
rce1
Conserved Hypothetical Protein; Endopeptidase which proteolytically removes the C-terminal three residues of farnesylated peptides containing the CAAX motif where C is cysteine, A is an aliphatic amino acid and X is any amino acid. Cleaves the CAAX motif C-terminal to both P1 and P1' positions. Hydrolysis depends on a farnesylated cysteine residue and no activity is shown towards geranylgeranylated peptides.
  
    0.888
MMP0484
Possible sodium/proton antiporter.
 
    0.881
MMP0786
Hypothetical protein.
   
    0.857
MMP0751
Conserved hypothetical archaeal protein.
   
    0.855
MMP1571
Conserved hypothetical archaeal protein.
   
    0.850
MMP0361
Hypothetical protein.
   
    0.754
MMP1620
Hypothetical.
   
    0.754
MMP0287
Conserved Hypothetical protein with 2 CBS domains.
  
    0.739
MMP0286
Conserved hypothetical protein; Belongs to the UPF0248 family.
  
    0.732
MMP0285
Phosphoesterase, RecJ-like:TrkA-N:Phosphoesterase, DHHA1.
       0.699
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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