STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0291Hydrogenase expression/formation protein related. (447 aa)    
Predicted Functional Partners:
fwdG
Tungsten containing formylmethanofuran dehydrogenase, subunit G; Citation: FEBS Lett. 1989 253: 226-30; Eur. J. Biocehem. 199642: 156-162.
  
    0.671
MMP1554
Conserved hypothetical archaeal protein.
  
    0.645
nac
Conserved hypothetical archaeal protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
  
    0.597
sepS
Phenylalanyl-tRNA synthetase alpha subunit; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys).
  
     0.544
ribC
Riboflavin synthase.
  
    0.488
mtrH
N5-methyltetrahydromethanopterin: methyltransferase, subunit H; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of MtrA.
  
    0.460
fdhB
Formate dehydrogenase beta subunit.
  
     0.459
fdhB-2
Formate dehydrogenase beta subunit.
  
     0.455
fwdD
Tungsten containing formylmethanofuran dehydrogenase, subunit D; Citation: Arch. Microbiol. 1998 170: 389-93; FEBS Lett. 1989 253: 226-30; Eur. J. Biochem. 1996 242: 156-162.
  
    0.439
MMP1052
Conserved hypothetical archaeal protein.
  
     0.437
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.