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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0409Conserved hypothetical archaeal protein. (386 aa)    
Predicted Functional Partners:
MMP0885
TPR repeat:ATP/GTP-binding site motif A (P-loop).
  
 0.938
MMP0276
Conserved hypothetical protein.
   
 0.934
MMP0673
TPR repeat.
   
 0.934
MMP0762
TPR repeat.
   
 0.934
MMP0873
TPR repeat.
   
 0.934
MMP0895
TPR repeat.
   
 0.934
MMP1143
TPR repeat.
   
 0.934
gapN
Aldehyde dehydrogenase; Involved in F420 biosynthesis through the oxidation of lactaldehyde to lactate.
 
  
 0.794
MMP1223
Conserved hypothetical archaeal protein.
  
    0.703
MMP0689
Xanthine/uracil permease family.
  
 
 0.665
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.