Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0489Conserved hypothetical protein. (153 aa)    
Predicted Functional Partners:
MMP0204
Conserved hypothetical protein; Contains flavoprotein domain.
  
    0.925
MMP0202
Conserved hypothetical protein.
  
  
 0.919
MMP0488
Low molecular weight phosphotyrosine protein phosphatase.
  
    0.589
MMP1162
Flavodoxin:Beta-lactamase-like.
  
    0.552
MMP1134
Type A flavoprotein; Citation: Eur. J. Biochem. 1998; 254: 325-332.
   
    0.493
MMP1135
Flavodoxin:Beta-lactamase-like.
   
    0.493
MMP0203
Conserved hypothetical protein; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
 
    0.460
MMP0490
Conserved hypothetical protein.
  
    0.454
MMP0199
Conserved hypothetical archaeal protein.
 
     0.430
MMP0491
MotA/TolQ/ExbB proton channel.
       0.406
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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