Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0495Conserved hypothetical protein. (364 aa)    
Predicted Functional Partners:
MMP0494
DEAD/DEAH box helicase domain-containing protein; Distinct helicase family member with a unique C-terminal domain including a metal-binding cysteine cluster.
 
    0.981
MMP0520
Cation transport ATPase.
   
    0.729
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
 
    0.724
MMP0484
Possible sodium/proton antiporter.
  
    0.504
MMP0496
Glutamate synthase subunit-related; Belongs to the glutamate synthase family.
  
    0.498
MMP0435
Hypothetical protein.
   
    0.488
rncS
Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain.
 
    0.486
MMP0870
2-hydroxyacid dehydrogenase, D-isomer specific.
   
    0.462
MMP0075
Conserved hypothetical protein.
  
    0.456
MMP0517
Conserved hypothetical protein.
  
    0.456
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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