Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0517Conserved hypothetical protein. (176 aa)    
Predicted Functional Partners:
MMP0005
Hypothetical protein.
   
    0.804
MMP0484
Possible sodium/proton antiporter.
  
  
 0.776
MMP0731
Exonuclease VII, small subunit related protein.
  
  
 0.774
MMP0018
Transcriptional regulator, LysR Family Member.
  
  
 0.691
MMP1267
Hypothetical protein.
   
    0.681
MMP1476
Conserved hypothetical archaeal protein.
   
    0.681
MMP1572
Hypothetical protein.
   
    0.681
MMP0520
Cation transport ATPase.
  
 
 0.679
MMP1620
Hypothetical.
   
    0.671
MMP0361
Hypothetical protein.
   
    0.666
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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