Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0519Conserved hypothetical protein. (125 aa)    
Predicted Functional Partners:
MMP1173
Conserved membrane protein.
   
    0.838
MMP0520
Cation transport ATPase.
  
    0.829
MMP0796
Probable sugar efflux transporter.
   
    0.829
MMP0733
Putative membrane pump.
   
    0.630
MMP0552
Conserved hypothetical protein.
   
    0.609
MMP0801
Unnamed protein product.
   
    0.605
cycZ
Conserved hypothetical protein.
   
    0.604
MMP0523
ABC transporter ATP-binding protein.
  
    0.596
MMP0518
Hypothetical protein.
  
    0.584
MMP0521
ABC transporter, permease protein.
  
    0.559
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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