Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MMP0534Conserved hypothetical protein; Contains a mechanosensitive ion channel domain. (360 aa)    
Predicted Functional Partners:
MMP0535
Conserved hypothetical archaeal protein.
  
    0.819
MMP0296
Conserved hypothetical archaeal protein.
  
    0.608
MMP1605
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
 0.607
nth1
Endonuclease III homologue; Citation: Nucleic Acids Res. (2001) 29: 604-613.
 
    0.605
MMP0536
Conserved hypothetical protein.
  
    0.521
MMP0538
Hypothetical protein.
  
    0.404
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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