Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0546Protein of unknown function DUF51. (203 aa)    
Predicted Functional Partners:
MMP1387
Protein of unknown function DUF52; Belongs to the MEMO1 family.
    0.995
MMP0544
MoaA/nifB/pqqE family.
     0.978
MMP1180
Conserved hypothetical protein.
 
     0.691
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
       0.689
MMP1109
Conserved hypothetical protein.
       0.689
nfo
Endonuclease IV; Citation: J. Bio. Chem. (2003) 278: 24563-24576.
       0.689
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.682
MMP1028
NFACT-R_1 domain-containing protein; Unnamed protein product.
 
   
 0.672
MMP0547
RecJ related protein; Citation: J. Bact. (2000) 182: 607-612.
  
  
 0.660
MMP1488
Modulator of DNA gyrase.
       0.656
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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