STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0546Protein of unknown function DUF51. (203 aa)    
Predicted Functional Partners:
MMP1387
Protein of unknown function DUF52; Belongs to the MEMO1 family.
    0.992
MMP0544
MoaA/nifB/pqqE family.
     0.974
MMP0543
Conserved hypothetical protein.
  
    0.701
MMP1180
Conserved hypothetical protein.
 
     0.694
MMP0547
RecJ related protein; Citation: J. Bact. (2000) 182: 607-612.
  
    0.630
MMP1028
NFACT-R_1 domain-containing protein; Unnamed protein product.
 
   
 0.503
hisB
Imidazoleglycerol-phosphate dehydratase; Citation: Tada S, Volrath S, Guyer D, Scheidegger A, Ryals J, Ohta D, Ward E.(1994).Plant Physiol 105:579-83.
  
    0.478
MMP1293
Glycosyl transferase, group 1.
  
    0.472
MMP0545
Molybdenum cofactor biosynthesis protein:MoeA N-terminal region, domain I and II:MoeA C-terminal, domain IV.
       0.454
MMP0549
Conserved hypothetical protein.
  
    0.452
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.