STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0551Binding-protein-dependent transport systems inner membrane component. (219 aa)    
Predicted Functional Partners:
MMP0229
ABC amino acid transport ATP binding protein.
 
 0.999
MMP0550
Similar to ABC-type amino acid transport system, periplasmic component.
 0.999
MMP1224
ABC-type amino acid transport/signal transduction systems periplasmic component-related.
 
 0.985
MMP0455
Probable amino-acid ABC transporter.
 
 0.983
yqiX
Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3.
 
 0.922
MMP0523
ABC transporter ATP-binding protein.
 
  
 0.910
MMP0770
Probable ABC transporter.
 
 0.893
MMP0635
ABC transporter:ATPase subunit.
 
  
 0.884
MMP1225
Amino acid ABC-type transporter related protein.
 
 0.874
MMP0552
Conserved hypothetical protein.
  
  
 0.867
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
Server load: low (28%) [HD]