Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMP0374 | MMP0604 | MMP0374 | MMP0604 | Conserved hypothetical protein. | Conserved Hypothetical Protein. | 0.998 |
MMP0374 | MMP0605 | MMP0374 | MMP0605 | Conserved hypothetical protein. | Conserved Hypothetical protein. | 0.911 |
MMP0374 | aIF-1A | MMP0374 | MMP0603 | Conserved hypothetical protein. | Translation initiation factor 1A (aIF-1A); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.423 |
MMP0374 | rps15 | MMP0374 | MMP1579 | Conserved hypothetical protein. | Probable SSU ribosomal protein S15P/S13E. | 0.997 |
MMP0374 | rps3ae | MMP0374 | MMP0669 | Conserved hypothetical protein. | SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.997 |
MMP0374 | rps4 | MMP0374 | MMP1320 | Conserved hypothetical protein. | SSU ribosomal protein S4P (S9E); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
MMP0374 | rps6e | MMP0374 | MMP1207 | Conserved hypothetical protein. | Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.997 |
MMP0374 | rpsC | MMP0374 | MMP1404 | Conserved hypothetical protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.996 |
MMP0374 | rpsE | MMP0374 | MMP1419 | Conserved hypothetical protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.997 |
MMP0374 | rpsK | MMP0374 | MMP1321 | Conserved hypothetical protein. | SSU ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.997 |
MMP0604 | MMP0374 | MMP0604 | MMP0374 | Conserved Hypothetical Protein. | Conserved hypothetical protein. | 0.998 |
MMP0604 | MMP0605 | MMP0604 | MMP0605 | Conserved Hypothetical Protein. | Conserved Hypothetical protein. | 0.970 |
MMP0604 | aIF-1A | MMP0604 | MMP0603 | Conserved Hypothetical Protein. | Translation initiation factor 1A (aIF-1A); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.997 |
MMP0604 | rps15 | MMP0604 | MMP1579 | Conserved Hypothetical Protein. | Probable SSU ribosomal protein S15P/S13E. | 0.973 |
MMP0604 | rps3ae | MMP0604 | MMP0669 | Conserved Hypothetical Protein. | SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.975 |
MMP0604 | rps4 | MMP0604 | MMP1320 | Conserved Hypothetical Protein. | SSU ribosomal protein S4P (S9E); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.995 |
MMP0604 | rps6e | MMP0604 | MMP1207 | Conserved Hypothetical Protein. | Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.997 |
MMP0604 | rpsC | MMP0604 | MMP1404 | Conserved Hypothetical Protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.975 |
MMP0604 | rpsE | MMP0604 | MMP1419 | Conserved Hypothetical Protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.996 |
MMP0604 | rpsK | MMP0604 | MMP1321 | Conserved Hypothetical Protein. | SSU ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.997 |
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