cmk protein (Methanococcus maripaludis S2) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

cmk

Cytidylate kinase. (178 aa)

Predicted Functional Partners:

rpl34e

0.998

rpl14e

0.995

rpl4

0.955

rplV

0.954

rplN

0.953

rplX

0.953

rps4e

0.951

nusA

0.943

rplE

0.943

MMP0157

0.941

Your Current Organism:

Methanococcus maripaludis S2

NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MMP0157	cmk	MMP0157	MMP0626	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	Cytidylate kinase.	0.941
MMP0157	nusA	MMP0157	MMP1366	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	KH domain:KH domain, type 1; Participates in transcription termination. Belongs to the NusA family.	0.940
MMP0157	rpl14e	MMP0157	MMP0625	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	KOW motif; Belongs to the eukaryotic ribosomal protein eL14 family.	0.929
MMP0157	rpl34e	MMP0157	MMP0627	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	Ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family.	0.927
MMP0157	rpl4	MMP0157	MMP1544	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	LSU Ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.940
MMP0157	rplE	MMP0157	MMP1412	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.875
MMP0157	rplN	MMP0157	MMP1409	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.932
MMP0157	rplV	MMP0157	MMP1403	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.945
MMP0157	rplX	MMP0157	MMP1410	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.925
MMP0157	rps4e	MMP0157	MMP1411	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	SSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family.	0.922
cmk	MMP0157	MMP0626	MMP0157	Cytidylate kinase.	Conserved hypothetical protein; DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.	0.941
cmk	nusA	MMP0626	MMP1366	Cytidylate kinase.	KH domain:KH domain, type 1; Participates in transcription termination. Belongs to the NusA family.	0.943
cmk	rpl14e	MMP0626	MMP0625	Cytidylate kinase.	KOW motif; Belongs to the eukaryotic ribosomal protein eL14 family.	0.995
cmk	rpl34e	MMP0626	MMP0627	Cytidylate kinase.	Ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family.	0.998
cmk	rpl4	MMP0626	MMP1544	Cytidylate kinase.	LSU Ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.955
cmk	rplE	MMP0626	MMP1412	Cytidylate kinase.	LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.943
cmk	rplN	MMP0626	MMP1409	Cytidylate kinase.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.953
cmk	rplV	MMP0626	MMP1403	Cytidylate kinase.	LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.954
cmk	rplX	MMP0626	MMP1410	Cytidylate kinase.	LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.953
cmk	rps4e	MMP0626	MMP1411	Cytidylate kinase.	SSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family.	0.951