Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0631Putatuve iron dependent repressor. (134 aa)    
Predicted Functional Partners:
feoB
Ferrous iron transporter (GTP-binding).
  
  
 0.687
MMP1617
Conserved Hypothetical protein.
     
 0.665
ehaN
Energy conserving hydrogenase A small subunit; Citation: Tersteegen, A. and R. Hedderich. 1999. Eur. J. Biochem. 264:930-43.
    
   0.619
ehbM
Energy conserving hydrogenase B small subunit; Citation: Tersteegen, A. and R. Hedderich. 1999. Eur. J. Biochem. 264:930-43.
    
   0.619
MMP0387
Microsomal signal peptidase 21 KD subunit; Citation: J. Biol. Chem. 265:9512.
  
    0.532
MMP1173
Conserved membrane protein.
  
  
 0.510
aIF-5A
Translation initiation factor IF-5a; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
 
 
   0.490
MMP0632
ATP/GTP-binding site motif A (P-loop).
       0.470
MMP0840
Transcriptional regulator, TetR Family Member; Citation: (1995) J. Mol. Biol. 247: 260-280.
 
  
 0.419
MMP1406
Protein translation factor SUI1 homolog; Citation: Auer,J., Spicker,G., Boeck,A.(1989) J. Mol. Biol. 209:21-36; Belongs to the SUI1 family.
   
   0.406
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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