Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0664Protein of unknown function DUF125. (186 aa)    
Predicted Functional Partners:
MMP0665
Conserved hypothetical protein; Belongs to the UPF0305 family.
       0.933
MMP0663
Sulfate transporter:Sulfate transporter/antisigma-factor antagonist STAS.
  
    0.717
MMP0520
Cation transport ATPase.
   
 
 0.642
MMP0710
Cation-transporting ATPase.
   
 
 0.642
MMP0429
Beta-Ig-H3/Fasciclin domain:Protein of unknown function DUF211.
       0.616
MMP0661
Putative ATP binding related protein.
  
    0.597
MMP0662
Hypothetical protein.
       0.580
MMP1204
Metallopeptidase family M24:Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase.
  
 
 0.580
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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