Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMP0693Aminoacyl-tRNA synthetase, class II. (288 aa)    
Predicted Functional Partners:
MMP0692
Conserved hypothetical protein.
  
   
0.618
MMP0694
Beta-lactamase-like:KH domain.
       0.551
MMP0691
Conserved hypothetical archaeal protein.
  
    0.528
MMP0690
Polyferredoxin.
  
    0.487
MMP0863
CBS domain.
   
    0.477
pcm
Protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
   
    0.474
MMP0638
Conserved hypothetical protein.
   
    0.434
MMP0194
Conserved hypothetical protein.
  
    0.420
MMP0306
Oxidoreductase family member subunit alpha; Citation: Zhang, Z. et al. 1996. J. Biochem. 120:587-99. Tersteegen, A. et al. 1997. Eur. J. Biochem. 244:862-8.
  
    0.411
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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