Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0700Transcriptional regulator PadR-like family; Citation: J. Bacteriol. 2000 182:6724-6731. (183 aa)    
Predicted Functional Partners:
MMP0699
C-5 cytosine-specific DNA methylase:Multi antimicrobial extrusion (MatE) protein.
  
    0.758
MMP1023
Transcriptional regulator, TetR Family Member.
 
  
 0.559
MMP0701
Conserved hypothetical protein.
       0.511
MMP0794
Hypothetical protein.
 
    0.483
MMP0674
Helix-turn-helix DNA binding protein.
 
  
 0.462
MMP0840
Transcriptional regulator, TetR Family Member; Citation: (1995) J. Mol. Biol. 247: 260-280.
 
  
 0.454
mptN
Conserved hypothetical protein; Catalyzes the ATP or GTP-dependent addition of one L- glutamate molecule to tetrahydromethanopterin, producing tetrahydrosarcinapterin.
       0.444
bioB-2
TonB-dependent receptor protein:Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.444
MMP0649
Carbamoyltransferase.
  
    0.420
MMP0586
Uncharacterized endonuclease III related protein; Citation: Nucleic Acids Res. (2001) 29: 604-613, Nature (2000) 403: 859-866.
  
    0.413
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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