STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0700Transcriptional regulator PadR-like family; Citation: J. Bacteriol. 2000 182:6724-6731. (183 aa)    
Predicted Functional Partners:
MMP0699
C-5 cytosine-specific DNA methylase:Multi antimicrobial extrusion (MatE) protein.
  
    0.759
MMP1023
Transcriptional regulator, TetR Family Member.
 
  
 0.579
MMP0701
Conserved hypothetical protein.
       0.514
MMP0840
Transcriptional regulator, TetR Family Member; Citation: (1995) J. Mol. Biol. 247: 260-280.
 
  
 0.481
MMP0794
Hypothetical protein.
 
    0.473
MMP1141
Lhr-like RNA helicase; Citation: J Bacteriol. 1995 Oct;177(19):5393-400.
 
   0.467
MMP0674
Helix-turn-helix DNA binding protein.
 
  
 0.460
mptN
Conserved hypothetical protein; Catalyzes the ATP or GTP-dependent addition of one L- glutamate molecule to tetrahydromethanopterin, producing tetrahydrosarcinapterin.
       0.447
bioB-2
TonB-dependent receptor protein:Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.437
MMP0649
Carbamoyltransferase.
  
    0.418
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.