Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MMP0723Conserved hypothetical protein. (114 aa)    
Predicted Functional Partners:
MMP0722
Conserved Hypothetical Archael Protein.
 
  
 0.984
MMP0721
Ferredoxin.
 
    0.971
hcp
Prismane; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
    0.914
MMP0852
Conserved hypothetical protein.
  
  
 0.676
glgP
Glycogen phosphorylase.
  
    0.674
MMP1291
Glycoside hydrolase, family 57.
  
    0.617
MMP0614
Related to iron-sulfur flavoprotein of Methanosarcina thermophila; Citation: J. Bact. 2001. 183(21): 6225-33.
 
    0.606
MMP0931
Probable chemotaxis-related protein.
   
   0.551
MMP0932
Probable chemotaxis-related protein.
   
   0.551
MMP0724
Hypothetical protein.
  
    0.491
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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