STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0730Protein of unknown function DUF6. (139 aa)    
Predicted Functional Partners:
MMP0731
Exonuclease VII, small subunit related protein.
  
    0.917
MMP0484
Possible sodium/proton antiporter.
   
    0.853
xseA
Exonuclease VII, large subunit:OB-fold nucleic acid binding domain.
  
    0.754
MMP0751
Conserved hypothetical archaeal protein.
   
    0.729
MMP0786
Hypothetical protein.
   
    0.729
MMP0733
Putative membrane pump.
  
    0.685
MMP1125
Conserved hypothetical protein.
   
    0.671
MMP0191
Conserved hypothetical protein; Esterase/lipase/thioesterase domain.
  
    0.662
MMP1620
Hypothetical.
   
    0.655
MMP0361
Hypothetical protein.
   
    0.650
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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