Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
MMP0758HNH endonuclease:HNH nuclease. (323 aa)    
Predicted Functional Partners:
MMP1110
Protein of unknown function DUF70.
   
    0.863
MMP0757
Conserved hypothetical protein.
 
    0.862
MMP0484
Possible sodium/proton antiporter.
   
    0.804
MMP0759
Putative lmo0304.
  
    0.751
MMP1620
Hypothetical.
   
    0.650
MMP0751
Conserved hypothetical archaeal protein.
   
    0.625
MMP0461
Hypothetical.
   
    0.620
MMP1285
Conserved hypothetical archaeal protein.
   
    0.620
MMP0361
Hypothetical protein.
   
    0.606
MMP1476
Conserved hypothetical archaeal protein.
   
    0.605
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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