Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MMP0760Hypothetical protein. (76 aa)    
Predicted Functional Partners:
fmdB
Molybdenum containing formylmethanofuran dehydrogenase, subunit B; Contains selenocysteine; Citation: FEBS Lett. 1989 253:226-30; Eur. J. Biochem. 1996 242:156-162.
   
  
 0.660
rps15
Probable SSU ribosomal protein S15P/S13E.
   
  
 0.660
amtB
Ammonia transporter.
      
 0.632
rpoE2
DNA-directed RNA polymerase subunit E; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.
   
  
 0.576
MMP0761
Hypothetical protein.
  
    0.554
MMP1036
Band 7 protein:Stomatin.
      
 0.504
MMP0759
Putative lmo0304.
  
    0.492
MMP0468
Hypothetical protein.
   
    0.488
MMP1710
Conserved hypothetical archeal protein.
   
  
 0.476
MMP0852
Conserved hypothetical protein.
   
  
 0.475
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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