Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MMP0768Conserved Hypothetical Protein. (472 aa)    
Predicted Functional Partners:
MMP0769
Conserved hypothetical archaeal protein.
  
    0.969
MMP0767
Conserved hypothetical protein.
  
    0.856
mtbA-2
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.740
mtaA
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.697
mtbA
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.697
mtaA-2
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.697
MMP1201
Staphylococcus nuclease (SNase-like):Thermonuclease; Citation: Mol. Cell. Biochem. (1978) 22: 67-77.
  
    0.666
hemB
Delta-aminolevulinic acid dehydratase; Citation: Microbiology. 2002 Aug;148(Pt 8):2273-82; Belongs to the ALAD family.
  
  
 0.666
MMP0896
Polysaccharide biosynthesis protein.
  
  
 0.661
hemC
Porphobilinogen deaminase; Citation: Microbiology. 2002 Aug;148(Pt 8):2273-82.
  
  
 0.650
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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