Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0778Hypothetical protein. (105 aa)    
Predicted Functional Partners:
MMP0780
Conserved hypothetical protein.
  
    0.806
MMP0781
Conserved hypothetical archaeal protein.
  
    0.791
MMP0774
Hypothetical protein.
  
    0.784
MMP0775
Hypothetical protein.
  
    0.762
MMP0779
Conserved hypothetical protein.
  
    0.756
MMP0782
Conserved hypothetical protein.
  
    0.576
MMP0772
Hypothetical protein.
  
    0.574
MMP0773
Conserved hypothetical archaeal protein.
  
    0.551
MMP0776
Conserved hypothetical archaeal protein.
  
    0.511
MMP0777
Hypothetical protein.
  
    0.503
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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