STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0787Transcriptional regulator, MarR Family Member. (164 aa)    
Predicted Functional Partners:
tgtA
tRNA-guanine(15) transglycosylase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
  
    0.608
MMP1304
Response regulator receiver.
  
  
 0.562
MMP0788
Conserved hypothetical protein; Methyl accepting chemotaxis protein signaling domain.
     
 0.490
MMP1028
NFACT-R_1 domain-containing protein; Unnamed protein product.
  
  
 0.475
birA
Biotin--protein ligase; Citation: Mukhopadhyay et al., JBC273:5155 (1998).
 
  
 0.470
MMP0585
Universal stress protein (Usp).
 
  
 0.439
MMP0849
L-lysine/ homoserine-homoserine lactone exporter family; Citation: Mol Microbiol 1996;22: 815-826.
 
  
 0.417
mre11
DNA repair exonuclease of the SbcD/Mre11-family; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family.
 
    0.415
MMP0339
NUDIX hydrolase; Citation: J. Bio. Chem. (1998) 273: 20924-20928.
 
  
 0.414
MMP1099
Phosphate ABC transporter, regulatory protein; Plays a role in the regulation of phosphate uptake.
 
  
 0.413
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.