Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0792Membrane protein. (331 aa)    
Predicted Functional Partners:
MMP0486
Conserved hypothetical protein.
 
  
 0.901
MMP0793
Possible predicted protein.
 
    0.859
MMP0795
Possible predicted protein.
 
    0.731
MMP0090
Glycosyl transferase; Citation: J Bacteriol. 2000 Oct;182(19):5620-3, J Bacteriol. 1992 Apr;174(8):2525-38.
   
 
 0.636
MMP0356
Glycosyl transferase, group 1.
   
 
 0.636
MMP1080
Glycosyl transferase, group 1.
   
 
 0.636
MMP1088
Glycosyl transferase, group 1.
   
 
 0.636
MMP1293
Glycosyl transferase, group 1.
   
 
 0.636
MMP0791
Transcriptional regulator, TetR Family Member.
  
  
 0.606
MMP0796
Probable sugar efflux transporter.
 
  
 0.590
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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