Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0802Iron-containing alcohol dehydrogenase. (389 aa)    
Predicted Functional Partners:
gapN
Aldehyde dehydrogenase; Involved in F420 biosynthesis through the oxidation of lactaldehyde to lactate.
 
 0.972
MMP0484
Possible sodium/proton antiporter.
  
  
 0.930
MMP0803
Conserved archaeal protein.
  
    0.911
MMP0751
Conserved hypothetical archaeal protein.
   
    0.901
MMP0461
Hypothetical.
   
    0.873
MMP1620
Hypothetical.
   
    0.873
MMP0786
Hypothetical protein.
   
    0.866
MMP0782
Conserved hypothetical protein.
   
    0.854
MMP0361
Hypothetical protein.
   
    0.850
MMP0208
Conserved hypothetical protein; Contains 4Fe-4S motif.
   
    0.848
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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