STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0806Conserved hypothetical protein. (239 aa)    
Predicted Functional Partners:
MMP1239
Conserved hypothetical protein.
  
 0.941
MMP0809
Phosphoribosylaminoimidazole carboxylase related protein.
 
  
 0.926
MMP0800
Conserved hypothetical Archael protein.
 
    0.883
MMP0805
Predicted protein.
  
    0.815
MMP0796
Probable sugar efflux transporter.
  
    0.616
MMP0769
Conserved hypothetical archaeal protein.
   
    0.604
MMP0802
Iron-containing alcohol dehydrogenase.
  
    0.564
MMP0804
Hypothetical protein.
  
    0.547
MMP0807
Carboxymuconolactone decarboxylase Related Protein.
  
    0.545
MMP0773
Conserved hypothetical archaeal protein.
   
    0.537
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.