Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
MMP0832Conserved Hypothetical Protein. (592 aa)    
Predicted Functional Partners:
mtbA
Uroporphyrinogen decarboxylase (URO-D).
 
  
 0.993
MMP0833
Conserved hypothetical protein.
 
    0.975
MMP0829
Coenzyme B12-binding:Cobalamin-dependent methionine synthase, B12-binding.
 
  
 0.919
mtaA
Uroporphyrinogen decarboxylase (URO-D).
 
  
 0.875
mtbA-2
Uroporphyrinogen decarboxylase (URO-D).
 
  
 0.873
MMP0114
Conserved hypothetical protein.
   
    0.857
cdh
CO dehydrogenase/acetyl-CoA synthase complex subunit gamma; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2).
   
 0.838
mtaA-2
Uroporphyrinogen decarboxylase (URO-D).
 
  
 0.736
mtbC
Coenzyme B12-binding:Cobalamin-dependent methionine synthase, B12-binding.
 
  
 0.702
MMP0974
Hypothetical protein.
   
    0.584
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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