STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0835Conserved hypothetical protein. (434 aa)    
Predicted Functional Partners:
MMP0829
Coenzyme B12-binding:Cobalamin-dependent methionine synthase, B12-binding.
  
  
 0.865
mtaA
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.766
mtbA
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.727
MMP0836
2-hydroxyglutaryl-CoA dehydratase (Component D) related protein; Citation: J Mol Biol 2001 Mar 16;307(1):297-308, Appl Microbiol Biotechnol. 2001 Oct;57(3):263-73.
  
    0.665
mtbC
Coenzyme B12-binding:Cobalamin-dependent methionine synthase, B12-binding.
  
  
 0.653
mtbA-2
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.642
mtaA-2
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.638
vhcD
Coenzyme F420-non-reducing hydrogenase subunit delta; Selenium independent; Citation: Berghofer, Y. et al. 1994. Mol. Gen. Genet. 242:369-373. Halboth,S., Klein,A. (1992) Mol. Gen. Genet. 233:217-224.
  
    0.617
MMP0114
Conserved hypothetical protein.
  
  
 0.493
MMP1539
Conserved hypothetical protein.
  
    0.460
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.