Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MMP08362-hydroxyglutaryl-CoA dehydratase (Component D) related protein; Citation: J Mol Biol 2001 Mar 16;307(1):297-308, Appl Microbiol Biotechnol. 2001 Oct;57(3):263-73. (393 aa)    
Predicted Functional Partners:
MMP0349
2-hydroxyglutaryl-CoA dehydratase (Component A) related protein; Citation: J Mol Biol 2001 Mar 16;307(1):297-308, Appl Microbiol Biotechnol. 2001 Oct;57(3):263-73.
 
 0.974
MMP0608
2-hydroxyglutaryl-CoA dehydratase (Component A) related protein; Citation: J Mol Biol 2001 Mar 16;307(1):297-308, Appl Microbiol Biotechnol. 2001 Oct;57(3):263-73.
 
 0.880
mtbA-2
Uroporphyrinogen decarboxylase (URO-D).
 
  
 0.668
MMP0835
Conserved hypothetical protein.
  
    0.663
mtbA
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.621
MMP0833
Conserved hypothetical protein.
 
  
 0.529
MMP0832
Conserved Hypothetical Protein.
   
    0.429
MMP1539
Conserved hypothetical protein.
 
    0.419
MMP0114
Conserved hypothetical protein.
  
    0.405
mtaA
Uroporphyrinogen decarboxylase (URO-D).
  
  
 0.400
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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