STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slpBS layer protein; Citation: FEMS Microbiol Rev. 1997 Jun;20(1-2):47-98; Extremophiles 6 (5), 351-358 (2002). (533 aa)    
Predicted Functional Partners:
MMP0124
Conserved hypothetical protein.
      
 0.915
pdaD
Pyruvoyl-dependent arginine decarboxylase, PvlArgDC, alpha and beta subunits; Citation: Graham et al, J. Biol. Chem. 277:23500-23507(2002); Belongs to the PdaD family.
   
  
 0.857
MMP0644
Cation efflux protein.
   
    0.855
mdh
Malate dehydrogenase, MDHII (NADP+-dependent); Catalyzes the reversible oxidation of malate to oxaloacetate.
   
  
 0.771
MMP1175
Unnamed protein product.
   
    0.681
flaB3
Flagellin B3; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
   
  
 0.672
MMP0387
Microsomal signal peptidase 21 KD subunit; Citation: J. Biol. Chem. 265:9512.
   
  
 0.670
flaB1
Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
   
  
 0.670
flaB2
Flagellin B2; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
   
  
 0.669
radA
DNA repair and recombination protein radA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
  
  
 0.666
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.