Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP0889Cobalamin (vitamin B12) biosynthesis CbiM protein. (212 aa)    
Predicted Functional Partners:
MMP0888
Putative cobalt transport protein.
  
 
 0.999
MMP0886
Cobalt transport system permease related protein.
 
 
 0.993
cbiO
Cobalt transport protein O; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.990
cbiQ
Cobalt transport protein Q.
 
 
 0.987
cbiN
Conserved hypothetical protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.978
cbiM
Cobalamin biosynthesis protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
  
0.931
MMP0965
Formylmethanofuran dehydrogenase subunit E related protein; Citation: Eur J Biochem 1996 Feb 15;236(1):309-17.
  
    0.896
MMP0885
TPR repeat:ATP/GTP-binding site motif A (P-loop).
     
 0.825
ehaP
Polyferredoxin; Citation: J. Mol. Evol. 1985 22: 20-31; J. Mol. Evol. 1989 29: 246-54.
  
  
 0.804
MMP1611
Conserved hypothetical protein.
       0.683
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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