STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0896Polysaccharide biosynthesis protein. (423 aa)    
Predicted Functional Partners:
MMP0800
Conserved hypothetical Archael protein.
  
    0.919
MMP0769
Conserved hypothetical archaeal protein.
  
    0.916
MMP1110
Protein of unknown function DUF70.
   
    0.852
MMP0796
Probable sugar efflux transporter.
  
    0.802
MMP0895
TPR repeat.
  
  
 0.770
MMP0484
Possible sodium/proton antiporter.
  
  
 0.759
MMP1201
Staphylococcus nuclease (SNase-like):Thermonuclease; Citation: Mol. Cell. Biochem. (1978) 22: 67-77.
 
  
 0.731
rncS
Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain.
 
  
 0.720
MMP0090
Glycosyl transferase; Citation: J Bacteriol. 2000 Oct;182(19):5620-3, J Bacteriol. 1992 Apr;174(8):2525-38.
 
  
 0.719
MMP0538
Hypothetical protein.
   
    0.687
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.