Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP0961Conserved hypothetical protein. (499 aa)    
Predicted Functional Partners:
MMP0963
Aquaporin related.
  
    0.985
MMP0962
Zinc finger protein.
  
    0.952
MMP0559
Family of unknown function ThiJ/PfpI.
   
    0.655
rbo
Desulfoferrodoxin, ferrous iron-binding site.
   
  
 0.582
MMP0692
Conserved hypothetical protein.
   
  
 0.546
MMP1174
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
   
    0.537
trxB
Thioredoxin reductase.
  
    0.530
MMP1160
Conserved hypothetical protein.
   
    0.477
MMP0964
Hypothetical protein.
  
    0.476
MMP0600
Hypothetical protein.
   
    0.462
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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