STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0965Formylmethanofuran dehydrogenase subunit E related protein; Citation: Eur J Biochem 1996 Feb 15;236(1):309-17. (192 aa)    
Predicted Functional Partners:
MMP0888
Putative cobalt transport protein.
  
    0.921
ftr
Formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr); Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
   
 
 0.921
MMP0889
Cobalamin (vitamin B12) biosynthesis CbiM protein.
  
    0.896
fdhA
Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol. 185:2548.
    
 0.720
fdhA-2
Formate dehydrogenase alpha subunit; Contains selenocysteine; Citation: J. Bacteriol 185:2548.
    
 0.720
cdhA
CO dehydrogenase/acetyl-CoA synthase complex subunit alpha; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
     
 0.703
MMP1176
Putative iron transport system substrate-binding protein, N-term half.
 
    0.697
MMP1177
Putative iron transport system substrate-binding protein, C-term half.
 
    0.694
fdhB
Formate dehydrogenase beta subunit.
    
 0.678
fdhB-2
Formate dehydrogenase beta subunit.
    
 0.678
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.