STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1022Conserved hypothetical protein. (388 aa)    
Predicted Functional Partners:
MMP1021
Conserved hypothetical protein.
 
    0.970
MMP1023
Transcriptional regulator, TetR Family Member.
  
    0.639
MMP0965
Formylmethanofuran dehydrogenase subunit E related protein; Citation: Eur J Biochem 1996 Feb 15;236(1):309-17.
       0.588
MMP1020
Protein of unknown function UPF0118.
       0.518
leuS
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.431
MMP1024
MCM family related protein; Citation: Nucleic Acids Res. 1992;20(21):5571-7. Molec. Microbiol. 1998; 29: 955-961. J. Biol. Chem. (2000) 275: 15049-15059; Belongs to the MCM family.
  
    0.404
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.