STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1048Conserved hypothetical protein; Belongs to the UPF0216 family. (129 aa)    
Predicted Functional Partners:
MMP1049
Related to ehbB of Methanothermobacter thermautotrophicus; Citation: Tersteegen, A. and R. Hedderich. 1999. Eur. J. Biochem. 264:930-43.
       0.891
MMP1170
Glycosyl transferase, family 2.
       0.804
atpD
A1A0 ATPase, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.676
MMP1047
Conserved hypothetical protein.
  
    0.649
atpB
A1A0 ATPase, subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
    0.571
atpF
A1A0 ATPase, subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.509
atpA
A1A0 ATPase, subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
  
    0.501
atpE
A1A0 ATPase, subunit IE; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.487
MMP0678
Predicted transcriptional regulator; Helix-turn-helix motif.
  
    0.431
glnA
Glutamine synthetase; Probably involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.
  
    0.430
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.