Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene neighborhood
gene co-occurrence
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MMP1069Protease IV; Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type. (308 aa)    
Predicted Functional Partners:
MMP0155
Conserved hypothetical protein.
 
     0.852
MMP1070
Conserved hypothetical archaeal protein; Citation: J. Biol. Chem. (2001) 276: 25654-25660.
  
    0.714
MMP1068
K+-dependent Na+/Ca+ exchanger related-protein:Sodium/calcium exchanger membrane region.
       0.700
secD
SecD/SecF/SecDF export membrane protein; Involved in protein export.
 
  
 0.696
ftsY
Signal recognition particle receptor SRalpha; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
     
 0.609
MMP1072
Aminotransferase (subgroup I) similar to Aromatic Aminotransferase; Ward DE, de Vos WM, van der Oost J (2002) Archaea 1:133-141; Citation: Matsui I, Matsui E, Sakai Y, Kikuchi H, Kawarabayasi Y, Ura H, Kawaguchi S, Kuramitsu S, Harata K. (2000)J Biol Chem 275:4871-9.
 
    0.593
gatA
Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
     
 0.521
MMP1071
Conserved hypothetical archaeal protein; Belongs to the UPF0201 family.
       0.506
MMP1067
Uncharacterized iron-sulfur protein MMP1067; Succinate dehydrogenase/fumarate reductase iron-sulfur subunit // Methanosarcina type heterodisulfide reductase subunit D; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
    0.499
MMP1549
AP endonuclease, family 2.
 
    0.492
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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