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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1071Conserved hypothetical archaeal protein; Belongs to the UPF0201 family. (139 aa)    
Predicted Functional Partners:
MMP1072
Aminotransferase (subgroup I) similar to Aromatic Aminotransferase; Ward DE, de Vos WM, van der Oost J (2002) Archaea 1:133-141; Citation: Matsui I, Matsui E, Sakai Y, Kikuchi H, Kawarabayasi Y, Ura H, Kawaguchi S, Kuramitsu S, Harata K. (2000)J Biol Chem 275:4871-9.
  
    0.865
MMP1306
Conserved hypothetical protein.
 
   
 0.719
MMP1282
Conseved hypothetical protein NTP-binding; Belongs to the UPF0200 family.
 
    0.652
MMP0398
Conserved hypothetical archaeal protein.
  
    0.633
MMP0296
Conserved hypothetical archaeal protein.
  
     0.628
rps3ae
SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
 
    0.628
MMP0154
Conserved hypothetical archaeal protein; Belongs to the UPF0288 family.
   
    0.620
MMP0055
Conserved hypothetical Archael protein.
 
    0.615
moaE
Molybdopterin biosynthesis MoaE.
   
    0.605
MMP1070
Conserved hypothetical archaeal protein; Citation: J. Biol. Chem. (2001) 276: 25654-25660.
  
    0.589
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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