STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1102Phospholipase D/Transphosphatidylase. (214 aa)    
Predicted Functional Partners:
MMP1642
ATP/GTP-binding site motif A (P-loop):Small GTP-binding protein domain.
  
 0.891
MMP1103
Conserved hypothetical protein.
  
    0.789
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
       0.628
atpK
A1A0 ATPase, subunit K; Citation: Extremophiles 7:249.
  
 
 0.586
argD
Aminotransferase (subgroup II) similar to Acetylornithine aminotransferase; Citation: Billheimer JT, Shen MY, Carnevale HN, Horton HR, Jones EE.(1979). Arch Biochem Biophys 195:401-13; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
  
 0.586
tpiA
Triosephosphate isomerase; Belongs to the triosephosphate isomerase family.
 
   
 0.553
MMP0567
Unnamed protein product.
  
 
 0.540
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
   
 0.532
sucC
succinate-CoA ligase (ADP-forming), beta chain.
     
 0.514
trxB
Thioredoxin reductase.
     
 0.512
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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