Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP1116Endoglucanase. (350 aa)    
Predicted Functional Partners:
MMP1117
Conserved hypothetical protein.
  
    0.606
MMP1204
Metallopeptidase family M24:Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase.
 
  
 0.549
MMP1148
Small nuclear ribonucleoprotein (Sm protein).
 
    0.528
rpe
Pentose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
    0.496
MMP1115
Transketolase, N terminal half.
  
  
 0.463
mvk
Mevalonate kinase; Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)- mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids; Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
       0.422
MMP1113
Transketoloase, C terminal half.
  
    0.407
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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