Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP1136Rubrerythrin. (139 aa)    
Predicted Functional Partners:
MMP1135
Flavodoxin:Beta-lactamase-like.
  
  
 0.766
hsp20
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.762
MMP1134
Type A flavoprotein; Citation: Eur. J. Biochem. 1998; 254: 325-332.
  
  
 0.647
aIF-1A
Translation initiation factor 1A (aIF-1A); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
     
 0.641
MMP0303
Rubredoxin; Citation: J. Biol. Inorg. Chem. 3, 484 (1998).
  
  
 0.584
amtB
Ammonia transporter.
  
  
 0.489
slpB
S layer protein; Citation: FEMS Microbiol Rev. 1997 Jun;20(1-2):47-98; Extremophiles 6 (5), 351-358 (2002).
   
  
 0.475
slp
S-layer protein; Citation: FEMS Microbiol Rev. 1997 Jun;20(1-2):47-98; Extremophiles 6 (5), 351-358 (2002).
   
  
 0.472
tfb
Transcription initiation factor B; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
   
  
 0.470
MMP1174
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.462
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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