Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
minDSeptum formation inhibitor-activating ATPase; Citation: Proc. National Acad. Sci. (2002) 99: 15693-15698; Mol. Micro. (2000) 37: 455-466; Mol. Micro. (2002) 43: 39-49. (262 aa)    
Predicted Functional Partners:
MMP1143
TPR repeat.
 
   
 0.607
cheB
Chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.570
MMP1535
Conserved hypothetical archaeal protein.
  
     0.564
uppP
Putative bacitracin resistance/ undecaprenol kinase protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP).
       0.534
secD
SecD/SecF/SecDF export membrane protein; Involved in protein export.
 
     0.533
secF
SecD/SecF/SecDF export membrane protein; Involved in protein export.
 
     0.484
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
  
 0.459
cheY
Chemotaxis protein CheY.
 
  
 0.429
MMP0932
Probable chemotaxis-related protein.
 
  
 0.426
MMP1516
Conserved hypothetical archaeal protein; Citation: Mol. Microbiol. (2002) 45: 59-71.
 
   
 0.404
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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