STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1168ABC transporter ATP-binding protein. (248 aa)    
Predicted Functional Partners:
MMP1169
Conserved hypothetical protein.
 
 0.999
MMP1166
Related to iron-sulfur flavoprotein of Methanosarcina thermophila; Citation: J. Bact. 2001. 183(21): 6225-33.
  
    0.869
MMP1167
Flavoprotein related protein.
  
    0.864
MMP1615
Conserved hypothetical protein.
  
  
 0.620
MMP1165
P-type Cu+ transporter; Haloacid dehalogenase/epoxide hydrolase:ATPase, E1-E2 type:Heavy metal transport/detoxification protein.
  
  
 0.586
MMP0025
Hypothetical protein.
  
  
 0.581
MMP1170
Glycosyl transferase, family 2.
     
 0.579
feoB
Ferrous iron transporter (GTP-binding).
     
 0.567
MMP0165
ABC transporter, family 2.
     
 0.525
pssA
Archaetidylserine synthase; Citation: J Bacteriol. 2003 Feb;185(4):1181-9; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.520
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.