Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MMP1169Conserved hypothetical protein. (418 aa)    
Predicted Functional Partners:
MMP1168
ABC transporter ATP-binding protein.
 
 0.999
MMP1167
Flavoprotein related protein.
  
    0.851
MMP1166
Related to iron-sulfur flavoprotein of Methanosarcina thermophila; Citation: J. Bact. 2001. 183(21): 6225-33.
  
    0.838
dnaB
DNA polymerase family B; Citation: J Bact 176:6402-6403 1994. Genes. Genet. Syst. 1998; 73: 323-336.
     
 0.642
MMP0176
CDC48 cell division cycle protein family member; ATP/GTP-binding site motif A (P-loop); Citation: Mol. Gen. Genet. (1999) 262: 559-567, Cell (1995) 82: 885-893.
   
  
 0.607
MMP1218
Conserved hypothetical protein.
   
    0.606
MMP1170
Glycosyl transferase, family 2.
     
 0.574
MMP1165
P-type Cu+ transporter; Haloacid dehalogenase/epoxide hydrolase:ATPase, E1-E2 type:Heavy metal transport/detoxification protein.
     
 0.541
MMP1615
Conserved hypothetical protein.
 
  
 0.515
pssA
Archaetidylserine synthase; Citation: J Bacteriol. 2003 Feb;185(4):1181-9; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.507
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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