Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MMP1177Putative iron transport system substrate-binding protein, C-term half. (204 aa)    
Predicted Functional Partners:
MMP1176
Putative iron transport system substrate-binding protein, N-term half.
  
 0.999
MMP1183
Iron ABC transporter ATPase subunit.
 
 
 0.948
MMP1178
Iron transport Periplasmic binding protein.
 
   
0.927
MMP0646
Hypothetical protein.
   
    0.901
MMP1175
Unnamed protein product.
 
    0.863
mdh
Malate dehydrogenase, MDHII (NADP+-dependent); Catalyzes the reversible oxidation of malate to oxaloacetate.
  
    0.859
MMP1182
Iron(III) dicitrate transport system permease protein.
 
 
 0.815
MMP0198
ABC-type iron(III) transport system, ATP binding protein.
  
 
 0.784
cbiA
Cobyrinic acid a,c-diamide synthase.
  
  
 0.721
cbiA-2
Cobyrinic acid a,c-diamide synthase:Cobyrinic acid a,c-diamide synthase CbiA.
  
  
 0.721
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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